Publications of Leander Schietgat

period 2008 - 2013

Articles in internationally reviewed journals

6 references

• Fannes, Thomas; Vandermarliere, Elien; Schietgat, Leander; Degroeve, Sven; Martens, Lennart; Ramon, Jan. Predicting tryptic cleavage from proteomics data using decision tree ensembles, Journal of Proteome Research, 2013

  @article{395858,
    author = "Fannes, Thomas and Vandermarliere, Elien and Schietgat, Leander and Degroeve, Sven and Martens, Lennart and Ramon, Jan",
    title = "Predicting tryptic cleavage from proteomics data using decision tree ensembles",
    journal = "Journal of Proteome Research",
    month = Apr,
    year = "2013",
    doi = "10.1021/pr4001114",
    url = "https://lirias.kuleuven.be/handle/123456789/395858",
  }
  

• Schietgat, Leander; Ramon, Jan; Bruynooghe, Maurice. A polynomial-time maximum common subgraph algorithm for outerplanar graphs and its application to chemoinformatics, Annals of Mathematics and Artificial Intelligence, 2013 (Accepted)

  @article{389466,
    author = "Schietgat, Leander and Ramon, Jan and Bruynooghe, Maurice",
    title = "A polynomial-time maximum common subgraph algorithm for outerplanar graphs and its application to chemoinformatics",
    journal = "Annals of Mathematics and Artificial Intelligence",
    year = "2013",
    note = "Accepted",
    url = "https://lirias.kuleuven.be/handle/123456789/389466",
  }
  

• Schietgat, Leander. Graph-based data mining for biological applications, AI Communications, volume 24, issue 1, pages 95-96, 2011

  @article{279940,
    author = "Schietgat, Leander",
    title = "Graph-based data mining for biological applications",
    journal = "AI Communications",
    volume = "24",
    number = "1",
    pages = "95--96",
    year = "2011",
    doi = "10.3233/AIC-2010-0482",
    url = "https://lirias.kuleuven.be/handle/123456789/279940",
  }
  

• Schietgat, Leander; Costa, Fabrizio; Ramon, Jan; De Raedt, Luc. Effective feature construction by maximum common subgraph sampling, Machine Learning, volume 83, issue 2, pages 137-161, 2011

  @article{270068,
    author = "Schietgat, Leander and Costa, Fabrizio and Ramon, Jan and De Raedt, Luc",
    title = "Effective feature construction by maximum common subgraph sampling",
    journal = "Machine Learning",
    volume = "83",
    number = "2",
    pages = "137--161",
    year = "2011",
    doi = "10.1007/s10994-010-5193-8",
    url = "https://lirias.kuleuven.be/handle/123456789/270068",
  }
  

• Schietgat, Leander; Vens, Celine; Struyf, Jan; Blockeel, Hendrik; Kocev, Dragi; Dzeroski, Saso. Predicting gene function using hierarchical multi-label decision tree ensembles, BMC Bioinformatics, volume 11, issue 2, 2010

  @article{261164,
    author = "Schietgat, Leander and Vens, Celine and Struyf, Jan and Blockeel, Hendrik and Kocev, Dragi and Dzeroski, Saso",
    title = "Predicting gene function using hierarchical multi-label decision tree ensembles",
    journal = "BMC Bioinformatics",
    volume = "11",
    number = "2",
    year = "2010",
    doi = "10.1186/1471-2105-11-2",
    url = "https://lirias.kuleuven.be/handle/123456789/261164",
  }
  

• Vens, Celine; Struyf, Jan; Schietgat, Leander; Dzeroski, Saso; Blockeel, Hendrik. Decision trees for hierarchical multi-label classification, Machine Learning, volume 73, issue 2, pages 185-214, 2008

  @article{186698,
    author = "Vens, Celine and Struyf, Jan and Schietgat, Leander and Dzeroski, Saso and Blockeel, Hendrik",
    title = "Decision trees for hierarchical multi-label classification",
    journal = "Machine Learning",
    volume = "73",
    number = "2",
    pages = "185--214",
    year = "2008",
    doi = "10.1007/s10994-008-5077-3",
    url = "https://lirias.kuleuven.be/handle/123456789/186698",
  }
  

Article in book, internationally recognised scientific publisher

1 reference

• Vens, Celine; Schietgat, Leander; Struyf, Jan; Blockeel, Hendrik; Kocev, Dragi; Dzeroski, Saso. Predicting gene functions using predictive clustering trees, Dzeroski, Saso; Goethals, Bart; Panov, Pance (eds.), Springer, 2010

  @incollection{272881,
    author = "Vens, Celine and Schietgat, Leander and Struyf, Jan and Blockeel, Hendrik and Kocev, Dragi and Dzeroski, Saso",
    title = "Predicting gene functions using predictive clustering trees",
    editor = "Dzeroski, Saso and Goethals, Bart and Panov, Pance",
    publisher = "Springer",
    year = "2010",
    doi = "10.1007/978-1-4419-7738-0\_{}12",
    url = "https://lirias.kuleuven.be/handle/123456789/272881",
  }
  

Papers at international conferences and symposia, published in full in proceedings

3 references

• Schietgat, Leander; Costa, Fabrizio; Ramon, Jan; De Raedt, Luc. Maximum common subgraph mining: A fast and effective approach towards feature generation, Blockeel, Hendrik; Borgwardt, Karsten; Yan, Xifeng (eds.), International Workshop on Mining and Learning with Graphs, Leuven, Belgium, 2-4 July 2009, 7th International Workshop on Mining and Learning with Graphs, Leuven, Belgium, July 2-4, 2009, Extended Abstracts, pages 1-3

  @inproceedings{241347,
    author = "Schietgat, Leander and Costa, Fabrizio and Ramon, Jan and De Raedt, Luc",
    title = "Maximum common subgraph mining: {A} fast and effective approach towards feature generation",
    booktitle = "7th International Workshop on Mining and Learning with Graphs, Leuven, Belgium, July 2-4, 2009, Extended Abstracts, ",
    editor = "Blockeel, Hendrik and Borgwardt, Karsten and Yan, Xifeng",
    pages = "1--3",
    month = Jul,
    year = "2009",
    url = "https://lirias.kuleuven.be/handle/123456789/241347",
  }
  

• Schietgat, Leander; Ramon, Jan; Bruynooghe, Maurice; Blockeel, Hendrik. An efficiently computable graph-based metric for the classification of small molecules, International Conference on Discovery Science, Budapest, Hungary, 13-16 October 2008, Lecture Notes in Computer Science, volume 5255, pages 197-209, Springer

  @inproceedings{186720,
    author = "Schietgat, Leander and Ramon, Jan and Bruynooghe, Maurice and Blockeel, Hendrik",
    title = "An efficiently computable graph-based metric for the classification of small molecules",
    booktitle = "Lecture Notes in Computer Science, ",
    publisher = "Springer",
    pages = "197--209",
    month = Oct,
    year = "2008",
    doi = "10.1007/978-3-540-88411-8\_{}20",
    url = "https://lirias.kuleuven.be/handle/123456789/186720",
  }
  

• Schietgat, Leander; Theys, Kristof; Ramon, Jan; Blockeel, Hendrik; Vandamme, Annemie. Distinguishing epidemiological dependent from treatment (resistance) dependent HIV mutations: problem statement, European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases, Antwerp, 15-19 September 2008, Proceedings of the 1st International Workshop on Statistical and Relational Learning in Bioinformatics, pages 1-8

  @inproceedings{197472,
    author = "Schietgat, Leander and Theys, Kristof and Ramon, Jan and Blockeel, Hendrik and Vandamme, Annemie",
    title = "Distinguishing epidemiological dependent from treatment (resistance) dependent {HIV} mutations: problem statement",
    booktitle = "Proceedings of the 1st International Workshop on Statistical and Relational Learning in Bioinformatics, ",
    pages = "1--8",
    month = Sep,
    year = "2008",
    url = "https://lirias.kuleuven.be/handle/123456789/197472",
  }
  

Meeting abstracts, presented at international conferences and symposia

6 references

• Schietgat, Leander; Fannes, Thomas; Ramon, Jan. Predicting protein function with the relative backbone position kernel, Journées Nationales de Chémoinformatique, Cabourg, France, 13-14 October 2011, Proceedings of the 5ièmes Journées Nationales de Chémoinformatique, page51

  @unpublished{321360,
    author = "Schietgat, Leander and Fannes, Thomas and Ramon, Jan",
    title = "Predicting protein function with the relative backbone position kernel",
    note = "Journ{\'e}es Nationales de Ch{\'e}moinformatique, Cabourg, France, 13-14 October 2011",
    booktitle = "Proceedings of the 5i{\`e}mes Journ{\'e}es Nationales de Ch{\'e}moinformatique",
    pages = "51--51",
    month = Oct,
    year = "2011",
    url = "https://lirias.kuleuven.be/handle/123456789/321360",
  }
  

• Schietgat, Leander; Poezevara, Guillaume; Bissell-Siders, Ryan; Bureau, Ronan; Crémilleux, Bruno; Lepailleur, Alban; Halm, Marie-Pierre; Ramon, Jan; Cuissart, Bertrand. New measures of interest associated to chemical patterns: definition, implementation and experimental assessment, Journées Nationales de Chémoinformatique, Cabourg, France, 13-14 October 2011, Proceedings of the 5ièmes Journées Nationales de Chémoinformatique, page14

  @unpublished{321372,
    author = "Schietgat, Leander and Poezevara, Guillaume and Bissell-Siders, Ryan and Bureau, Ronan and Cr{\'e}milleux, Bruno and Lepailleur, Alban and Halm, Marie-Pierre and Ramon, Jan and Cuissart, Bertrand",
    title = "New measures of interest associated to chemical patterns: definition, implementation and experimental assessment",
    note = "Journ{\'e}es Nationales de Ch{\'e}moinformatique, Cabourg, France, 13-14 October 2011",
    booktitle = "Proceedings of the 5i{\`e}mes Journ{\'e}es Nationales de Ch{\'e}moinformatique",
    pages = "14--14",
    month = Oct,
    year = "2011",
    url = "https://lirias.kuleuven.be/handle/123456789/321372",
  }
  

• Schietgat, Leander; Aryal, Sunil; Ramon, Jan. Predicting protein function with the relative backbone position kernel, European Conference on Computational Biology, Gent, 26-29 September 2010

  @unpublished{271998,
    author = "Schietgat, Leander and Aryal, Sunil and Ramon, Jan",
    title = "Predicting protein function with the relative backbone position kernel",
    note = "European Conference on Computational Biology, Gent, 26-29 September 2010",
    month = Sep,
    year = "2010",
    url = "https://lirias.kuleuven.be/handle/123456789/271998",
  }
  

• Schietgat, Leander; Vens, Celine; Struyf, Jan; Blockeel, Hendrik; Kocev, Dragi; Dzeroski, Saso. Predicting gene function in S. cerevisiae and A. thaliana using hierarchical multi-label decision trees, European Conference on Computational Biology, Cagliari, Italy, 22-26 September 2008

  @unpublished{198615,
    author = "Schietgat, Leander and Vens, Celine and Struyf, Jan and Blockeel, Hendrik and Kocev, Dragi and Dzeroski, Saso",
    title = "Predicting gene function in {S}. cerevisiae and {A}. thaliana using hierarchical multi-label decision trees",
    note = "European Conference on Computational Biology, Cagliari, Italy, 22-26 September 2008",
    year = "2008",
    url = "https://lirias.kuleuven.be/handle/123456789/198615",
  }
  

• Schietgat, Leander; Vens, Celine; Struyf, Jan; Kocev, Dragi; Dzeroski, Saso; Blockeel, Hendrik. Predicting gene function in S. cerevisiae and A. thaliana using hierarchical multi-label decision tree ensembles, Spring Workshop on Mining and Learning, Traben-Trarbach, Germany, 23-25 April 2008

  @unpublished{183260,
    author = "Schietgat, Leander and Vens, Celine and Struyf, Jan and Kocev, Dragi and Dzeroski, Saso and Blockeel, Hendrik",
    title = "Predicting gene function in {S}. cerevisiae and {A}. thaliana using hierarchical multi-label decision tree ensembles",
    note = "Spring Workshop on Mining and Learning, Traben-Trarbach, Germany, 23-25 April 2008",
    year = "2008",
    url = "https://lirias.kuleuven.be/handle/123456789/183260",
  }
  

• Schietgat, Leander; Vens, Celine; Struyf, Jan; Kocev, Dragi; Dzeroski, Saso; Blockeel, Hendrik. Predicting gene function in S. cerevisiae and A. thaliana using hierarchical multi-label decision tree ensembles, BioSapiens Network of Excellence Workshop: From Genome to Proteome and Biological Function, Brussels, Belgium, 2 April 2008

  @unpublished{177048,
    author = "Schietgat, Leander and Vens, Celine and Struyf, Jan and Kocev, Dragi and Dzeroski, Saso and Blockeel, Hendrik",
    title = "Predicting gene function in {S}. cerevisiae and {A}. thaliana using hierarchical multi-label decision tree ensembles",
    note = "BioSapiens Network of Excellence Workshop: From Genome to Proteome and Biological Function, Brussels, Belgium, 2 April 2008",
    month = Apr,
    year = "2008",
    url = "https://lirias.kuleuven.be/handle/123456789/177048",
  }
  

Meeting abstracts, presented at other conferences and symposia

1 reference

• Fannes, Thomas; Vandermarliere, Elien; Schietgat, Leander; Martens, Lennart; Ramon, Jan. Predicting trypsin cleavage sites based on sequence information, Belgian Proteomics, Ghent, 29-30 november 2012 3/bepac12_poster.odp

  @unpublished{368067,
    author = "Fannes, Thomas and Vandermarliere, Elien and Schietgat, Leander and Martens, Lennart and Ramon, Jan",
    title = "Predicting trypsin cleavage sites based on sequence information",
    note = "Belgian Proteomics, Ghent, 29-30 november 2012",
    month = Nov,
    year = "2012",
    url = "https://lirias.kuleuven.be/handle/123456789/368067",
  }
  

Thesis

1 reference

• Schietgat, Leander. Graph-Based Data Mining for Biological Applications , PhD thesis, Informatics Section, Department of Computer Science, Faculty of Engineering Science, May 2010, Blockeel, Hendrik and Bruynooghe, Maurice (supervisors)

  @phdthesis{267094,
    author = "Schietgat, Leander",
    title = "Graph-{B}ased {D}ata {M}ining for {B}iological {A}pplications ",
    school = "Informatics Section, Department of Computer Science, Faculty of Engineering Science",
    month = May,
    year = "2010",
    note = "Blockeel, Hendrik and Bruynooghe, Maurice (supervisors)",
    url = "https://lirias.kuleuven.be/handle/123456789/267094",
  }
  

Internal reports

1 reference

• Schietgat, Leander; Vens, Celine; Struyf, Jan; Blockeel, Hendrik; Kocev, Dragi; Dzeroski, Saso. Predicting gene function in S. cerevisiae and A. thaliana using hierarchical multi-label decision tree ensembles, CW Reports, volume CW528, 12 pages, Department of Computer Science, K.U.Leuven, Leuven, Belgium, October 2008

  @techreport{201881,
    author = "Schietgat, Leander and Vens, Celine and Struyf, Jan and Blockeel, Hendrik and Kocev, Dragi and Dzeroski, Saso",
    title = "Predicting gene function in {S}. cerevisiae and {A}. thaliana using hierarchical multi-label decision tree ensembles",
    institution = "Department of Computer Science, K.U.Leuven",
    location = "Leuven, Belgium",
    type = "CW Reports",
    number = "CW528",
    month = Oct,
    year = "2008",
    url = "https://lirias.kuleuven.be/handle/123456789/201881",
  }
  

No publications found for the period 2008-2013 and the types

• Articles in other journals
• Books, internationally recognised scientific publisher; as author
• Other published books; as author
• Books, internationally recognised scientific publisher; as editor
• Other published books; as editor
• Article in other published book
• Papers at other conferences and symposia, published in full in proceedings
• Review
• Translation without scientific introduction
• Scientific popularisation
• Misc.
• External reports

 
Last update local database Sun May 19 2013 0:18 am; It contains 33 publications of Leander Schietgat.